J2a2 2015-07-28
The publication of Francalacci et al. 2015 Sardinian samples 826-835 as well the BigY result of 208140 Kuwait allowed further refinement of the J2a2 subclades which is very needed since not many Y-NextGenSequences in this Haplogroup are known. Earlier ancient and modern genomes allowed the discovery of J2a2-PH3085,SK1403: Ancient Altai, modern Uygur and Turkish.
Sardinian 826-828: form the Z28317,Z28324 clade downstream of PF5058,PF5035 and parallel to PF7384,PF5000.
Sardinian 827-828: form the Z28370,Z28373 clade approx. downstream of Z28317,Z28324.
E16051 Lebanon BigY results by Geno2 PF5058,PF5035(xPF7384,PF5000) are pending and expected to share some SNPs with the Sardinians.
Sardinian 832-835: form the PF5048,PF5070 clade which was already included in the J2-M172 Research Tree but with the new data seems to be confirmed and not sharing any SNPs downstream of PF5056,PF4993 with the other two subclades Z35890,P279 and PH3085,SK1403.
Sardinian 830-831 and 208140 Kuwait: form the Z28420,Z38500 clade downstream of Z35890,P279 and parallel to M340.
Sardinian 830-831: form the Z28412,Z28424 clade approx. downstream of Z28420,Z38500.
It would be very useful for better comparison if 208140 Kuwait orders the YFull analysis and joins the YF-J2a group.
Involved SNPs
PF5050 Additional equiv. SNPs:
| 2771681 | C | G | J2a2 | Z35772 |
| 17784597 | G | T | J2a2 | Z35773 |
| 21498408 | A | C | J2a2 | Z35774 |
| 22517208 | C | G | J2a2 | Z35775 |
| 8151589 | G | A | J2a2 | Z38487 |
Z35890,P279 Additional equiv. SNPs:
| 8562101 | T | C | J2a2a1a1 | Z35890 |
| 7053529 | T | C | J2a2a1a1 | Z37824 |
| 9822441 | C | G | J2a2a1a1 | Z37825 |
| 23590801 | T | C | J2a2a1a1 | Z37826 |
| 16280809 | A | C | J2a2a1a1 | Z38497 |
Z28420,Z38500
| 15903208 | A | G | J2a2a1a1b | Z28420 |
| 24002273 | G | T | J2a2a1a1b | Z38500 |
| 14021829 | C | A | J2a2a1a1b approx. | Z38515 |
| 14190885 | C | T | J2a2a1a1b approx. | Z38516 |
| 14415604 | A | C | J2a2a1a1b approx. | Z38517 |
Z28412,Z28424
| 23294100 | C | A | J2a2a1a1b1 approx. | Z28411 |
| 15308317 | T | C | J2a2a1a1b1 approx. | Z28412 |
| 21841018 | C | A | J2a2a1a1b1 approx. | Z28413 |
| 16456278 | C | T | J2a2a1a1b1 approx. | Z28414 |
| 18980884 | C | T | J2a2a1a1b1 approx. | Z28415 |
| 23029428 | G | A | J2a2a1a1b1 approx. | Z28416 |
| 18199809 | T | C | J2a2a1a1b1 approx. | Z28417 |
| 19560421 | T | G | J2a2a1a1b1 approx. | Z28418 |
| 17112461 | C | T | J2a2a1a1b1 approx. | Z28419 |
| 17661691 | G | A | J2a2a1a1b1 approx. | Z28421 |
| 18159848 | T | C | J2a2a1a1b1 approx. | Z28422 |
| 19149033 | G | C | J2a2a1a1b1 approx. | Z28423 |
| 21837251 | C | T | J2a2a1a1b1 approx. | Z28424 |
PF5048,PF5070
| 21858409 | T | C | J2a2a1a3 approx. | PF5048 |
| 23607452 | C | A | J2a2a1a3 approx. | PF5061 |
| 8457657 | A | G | J2a2a1a3 approx. | PF5070 |
| 9064867 | T | C | J2a2a1a3 approx. | PF5072 |
| 22937166 | T | G | J2a2a1a3 approx. | PF5082 |
| 8676462 | C | T | J2a2a1a3 approx. | Z38498 |
| 7341882 | A | T | J2a2a1a3 approx. | Z28427 |
Z28317,Z28324
| 17741700 | T | C | J2a2a2 | Z28306 |
| 7075373 | G | C | J2a2a2 | Z28317 |
| 19054115 | C | T | J2a2a2 | Z28320 |
| 7109579 | T | C | J2a2a2 | Z28321 |
| 15129155 | C | G | J2a2a2 | Z28324 |
| 28784560 | C | T | J2a2a2 | Z28326 |
| 17883421 | T | C | J2a2a2 | Z28328 |
| 23073420 | C | T | J2a2a2 | Z28361 |
Z28370,Z28373
| 17942545 | C | G | J2a2a2a approx. | Z28367 |
| 23289386 | G | A | J2a2a2a approx. | Z28368 |
| 2678047 | C | T | J2a2a2a approx. | Z28369 |
| 17511658 | A | T | J2a2a2a approx. | Z28370 |
| 23486681 | T | A | J2a2a2a approx. | Z28371 |
| 18794816 | C | A | J2a2a2a approx. | Z28372 |
| 15359752 | C | T | J2a2a2a approx. | Z28373 |
| 16001844 | G | T | J2a2a2a approx. | Z28374 |